Index A | B | C | D | E | F | G | I | L | M | N | O | P | Q | R | S | T | U | V | Y A add_source() (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) add_synonym() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) adelete() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) age (lnschema_covim.Biosample attribute) alignment_pipeline (lnschema_covim.Biosample attribute) arefresh_from_db() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) artifacts (lnschema_covim.Biosample attribute) asave() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) B Biosample (class in lnschema_covim) branch (lnschema_covim.Biosample attribute) (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) (lnschema_covim.Study attribute) C clean() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) clean_fields() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) comments (lnschema_covim.Study attribute) comorbidities (lnschema_covim.Biosample attribute) Comorbidity (class in lnschema_covim) created_at (lnschema_covim.Biosample attribute) (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) (lnschema_covim.Study attribute) created_by (lnschema_covim.Biosample attribute) (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) (lnschema_covim.Study attribute) crp (lnschema_covim.Biosample attribute) D data_modality (lnschema_covim.Biosample attribute) date_error_message() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) date_of_pcr_test (lnschema_covim.Biosample attribute) date_of_sample_collection (lnschema_covim.Biosample attribute) date_of_vaccination (lnschema_covim.Biosample attribute) days_post_icu_admission (lnschema_covim.Biosample attribute) days_post_symptom_onset (lnschema_covim.Biosample attribute) delete() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) description (lnschema_covim.Study attribute) detection_method (lnschema_covim.Biosample attribute) df() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) disease_phase (lnschema_covim.Biosample attribute) DiseasePhase (in module lnschema_covim.types) donor_id (lnschema_covim.Biosample attribute) donor_uid (lnschema_covim.Biosample attribute) E experiment_description (lnschema_covim.Biosample attribute) experiment_type (lnschema_covim.Biosample attribute) ExperimentType (in module lnschema_covim.types) F files_mock_bonn() (in module lnschema_covim.datasets) filter() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) from_source() (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) from_values() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) G get() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) get_constraints() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) get_deferred_fields() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) Group (in module lnschema_covim.types) group (lnschema_covim.Biosample attribute) I immunocompromised_category (lnschema_covim.Biosample attribute) immunocompromised_class (lnschema_covim.Biosample attribute) immunocompromised_condition (lnschema_covim.Biosample attribute) import_source() (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) Infection (class in lnschema_covim) ingest_markers() (in module lnschema_covim) inspect() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) inspect_markers() (in module lnschema_covim) institute_abbreviation (lnschema_covim.Biosample attribute) InstituteAbbreviation (in module lnschema_covim.types) instrument_type (lnschema_covim.Biosample attribute) internal_id (lnschema_covim.Biosample attribute) L leukocytes (lnschema_covim.Biosample attribute) list_files_from_biosample_form() (in module lnschema_covim) lnschema_covim module lnschema_covim.datasets module lnschema_covim.types module lookup() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) lymphocytes (lnschema_covim.Biosample attribute) M maximal_severity (lnschema_covim.Biosample attribute) Medication (class in lnschema_covim) medications (lnschema_covim.Biosample attribute) methodology (lnschema_covim.Study attribute) module lnschema_covim lnschema_covim.datasets lnschema_covim.types N name (lnschema_covim.Biosample attribute) (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) (lnschema_covim.Study attribute) natural_killers (lnschema_covim.Biosample attribute) neutrophils (lnschema_covim.Biosample attribute) O ontology_id (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) organism (lnschema_covim.Biosample attribute) other_severity_classification (lnschema_covim.Biosample attribute) P path_mock_bonn() (in module lnschema_covim.datasets) pcr_test_result (lnschema_covim.Biosample attribute) PcrTestResult (in module lnschema_covim.types) prepare_database_save() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) primary_diagnosis (lnschema_covim.Biosample attribute) protocol_details (lnschema_covim.Biosample attribute) public() (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) Q query_children() (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) query_parents() (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) R reference_genome (lnschema_covim.Biosample attribute) references (lnschema_covim.Biosample attribute) refresh_from_db() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) remove_synonym() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) rename_featureset_members() (in module lnschema_covim) run (lnschema_covim.Biosample attribute) (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) (lnschema_covim.Study attribute) S Sample (in module lnschema_covim.types) sample_id (lnschema_covim.Biosample attribute) sample_type (lnschema_covim.Biosample attribute) sample_type_comments (lnschema_covim.Biosample attribute) save() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) save_base() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) search() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) secondary_infections (lnschema_covim.Biosample attribute) sequencing_platform (lnschema_covim.Biosample attribute) serializable_value() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) set_abbr() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) severity (lnschema_covim.Biosample attribute) severity_criteria (lnschema_covim.Biosample attribute) Sex (in module lnschema_covim.types) sex (lnschema_covim.Biosample attribute) source (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) space (lnschema_covim.Biosample attribute) (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) (lnschema_covim.Study attribute) specificity (lnschema_covim.Biosample attribute) standardize() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) standardize_markers() (in module lnschema_covim) status_on_release (lnschema_covim.Biosample attribute) StatusOnRelease (in module lnschema_covim.types) studies (lnschema_covim.Biosample attribute) Study (class in lnschema_covim) study_id (lnschema_covim.Study attribute) T timepoint (lnschema_covim.Biosample attribute) transfer_artifact_to_immunohub() (in module lnschema_covim) transfer_biosample_to_immunohub() (in module lnschema_covim) U uid (lnschema_covim.Biosample attribute) (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) (lnschema_covim.Study attribute) unique_error_message() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) updated_at (lnschema_covim.Biosample attribute) (lnschema_covim.Comorbidity attribute) (lnschema_covim.Infection attribute) (lnschema_covim.Medication attribute) (lnschema_covim.Study attribute) urldownload() (in module lnschema_covim.datasets) using() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) V vaccination_status (lnschema_covim.Biosample attribute) validate() (lnschema_covim.Biosample class method) (lnschema_covim.Comorbidity class method) (lnschema_covim.Infection class method) (lnschema_covim.Medication class method) (lnschema_covim.Study class method) validate_constraints() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) validate_unique() (lnschema_covim.Biosample method) (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) (lnschema_covim.Study method) view_children() (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) view_parents() (lnschema_covim.Comorbidity method) (lnschema_covim.Infection method) (lnschema_covim.Medication method) Y year_last_transplant (lnschema_covim.Biosample attribute)